Commit Graph

1957 Commits

Author SHA1 Message Date
gsxdsm
7b19f9796c test: remove real-time waits from the slowest test files (FN-5048) (#1784)
Removes real wall-clock waits and per-test rebuilds from the slowest
test files, replacing them with deterministic seams. **No assertions
weakened, no timeouts widened, no retries added** — this is anti-pattern
removal per FN-5048, verified by re-running each file.

## Changes

| File | What | Result |
|---|---|---|
| `dashboard/.../insights-routes.test.ts` | Boot server+store **once**
in `beforeAll` (was `createServer` + `TaskStore.init` per test ×24);
reset insight tables per test for isolation; drive sweeper via fake
timers | test-exec **~3.7s → ~0.8s** |
| `core/.../db.test.ts` | Fixed 150ms write-lock hold → manual stdin
signal-release (keeps the real OS-lock contention under test); fixed a
real EPIPE on redundant release | 152 pass, non-flaky / 8 runs; −300ms
dead wait |
| `core/.../mission-store.test.ts` | 4 real `setTimeout` sleeps (only
there to force distinct timestamps) → `vi.setSystemTime` controlled
clock | anti-pattern removed |
| `core/.../agent-store.test.ts` | 1 real ordering-sleep → injected
`renewedAt` clock; **assertions strengthened** to pin exact timestamp
values | anti-pattern removed |
| `engine/.../in-process-runtime.test.ts` | Fake the one real 25ms
sleep; drop its inflated 30s per-test timeout | anti-pattern removed |

## Honest accounting
- The **real wins** are `insights-routes` (per-test server boot
eliminated, ~75% execution-time cut) and `db` (dead lock-hold removed).
- The **timestamp-sleep removals** (mission-store, agent-store,
in-process-runtime) are small absolute wins — the headline per-file
durations (16–25s) were **full-suite shard contention, not in-file dead
time** (each runs in 3–10s isolated). But they eliminate the FN-5048
real-wait anti-pattern, so a hub edit no longer drags real sleeps into
every `--changed` selection.
- **`workflow-routes.test.ts` was evaluated for splitting and
deliberately NOT split.** A measured A/B showed the 4-way split
*regressed* wall-clock (6s → 11s): the file is import/transform-bound
(per-file esbuild + `@fusion/core`/express import ≈ 5s > the ~4.3s test
runtime), and per-test store migration was already amortized by
`installInMemoryDbSnapshot`. Splitting only multiplies the dominant
fixed cost. Left intact.

## Verification
- `core` 612/612, `dashboard` 24/24, `engine` 78/78 (file-scoped).
- `tsc --noEmit` clean on all 3 packages; eslint clean.

Follow-up (not in this PR): `scripts/test-timings.json` is stale (its
former #1 file no longer exists) — refresh via `pnpm test:velocity --
--measure --write-report` so the watchdog budgets and velocity report
reflect reality.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

<!-- stage-review-badge-begin -->

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<!-- This is an auto-generated comment: release notes by coderabbit.ai
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## Summary by CodeRabbit

* **Tests**
* Made several test suites more deterministic by replacing real-time
delays with controlled timers and fixed timestamps.
* Improved lock and task checkout tests to use manual release signals,
reducing timing-related flakiness.
* Streamlined route test setup/teardown for faster, more reliable runs.
* Added safer cleanup around timer-based tests to avoid intermittent
failures.

<!-- end of auto-generated comment: release notes by coderabbit.ai -->
2026-06-25 22:35:53 -07:00
gsxdsm
50f5c36660 feat(core): per-stage column dwell instrumentation (#1781)
## Why

Diagnosing "tasks take too long" showed the dominant end-to-end
wall-clock is **waiting**, not work: tasks sit in `todo` (queue) and
`in-review` (merge wait) far longer than the agent actually runs. Today
only `cumulativeActiveMs` exists, which measures **in-progress time
only** — every other stage's dwell had to be reconstructed by hand from
agent logs.

## What

Adds `columnDwellMs?: Record<string, number>` to `Task` — a per-column
accumulator (column name → cumulative ms), recorded at the **same store
column-transition seam** as `cumulativeActiveMs` (`moveTaskInternal`).
On each move it adds `columnMovedAt(new) − columnMovedAt(prev)` to the
bucket for the column being left:

- clamped `>= 0` (clock skew safe);
- unparseable/missing prior timestamp and zero-dwell moves are skipped
(no spurious buckets);
- second visits **add** to the existing bucket (multi-visit churn is
captured);
- flag-independent — keys off the generic `columnMovedAt` delta, so it
runs for both the workflow-hook and legacy-inline move paths.

This makes per-stage dwell directly queryable, the same way
`productivity-analytics.ts` already consumes `cumulativeActiveMs`.

## Persistence

JSON-text task column, following the v129 `workspaceWorktrees` precedent
exactly: `SCHEMA_SQL` column + `SCHEMA_VERSION` 129→130 + a versioned
`addColumnIfMissing` migration. Additive and behavior-preserving —
pre-existing rows start NULL and accumulate from their next transition.
Survives archive/restore (added to the archive-entry mapping).

## Tests

`src/__tests__/store-execution-timing.test.ts` — new regression asserts
dwell across
`todo→in-progress→in-review→done→todo→in-progress→in-review` accumulates
the right per-column ms (second visits add) and survives a `getTask` DB
round-trip.

```
pnpm --filter @fusion/core exec vitest run src/__tests__/store-execution-timing.test.ts ... --reporter=dot
→ store-execution-timing 5/5, schema suites (goals/secrets) green, 17/17 total
```

Migration chain verified end-to-end (secrets-schema test climbs v11/v82
→ v130). No hardcoded literal version assertions in the suite; schema
tests assert against the `SCHEMA_VERSION` constant.

`@fusion/core` is private — no changeset.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

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<!-- This is an auto-generated comment: release notes by coderabbit.ai
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## Summary by CodeRabbit

* **New Features**
* Added per-column dwell timing to tasks, showing how long work spent in
each column across multiple visits.
  * Preserved this timing data when tasks are archived and restored.

* **Bug Fixes**
* Task timing now updates correctly during column moves, including
repeated returns to the same column.
* Existing data can be upgraded to the new timing format without
breaking stored tasks.

* **Tests**
* Added coverage for multi-step task movement and data reloading to
verify timing totals stay accurate.

<!-- end of auto-generated comment: release notes by coderabbit.ai -->
2026-06-25 22:23:48 -07:00
gsxdsm
207d2b899a test: remove real-time waits from slow test files (FN-5048)
Replace real wall-clock waits and per-test rebuilds in the slowest test files
with deterministic seams. No assertions weakened, no timeouts widened, no
retries added — anti-pattern removal only.

- insights-routes.test.ts: boot the server + store ONCE in beforeAll (was a full
  createServer + TaskStore.init per test x24), reset insight tables per test for
  isolation, drive the sweeper via fake timers. Test-execution time ~3.7s -> ~0.8s.
- db.test.ts: convert the fixed 150ms write-lock hold to manual stdin signal-
  release; keeps the real OS-lock contention under test, removes 2x150ms dead
  wait. Fixed a real EPIPE on redundant release. 152 pass, non-flaky over 8 runs.
- mission-store.test.ts / agent-store.test.ts: replace real setTimeout sleeps
  used only to force distinct timestamps with a controlled clock (vi.setSystemTime
  / injected renewedAt). agent-store assertions strengthened to pin exact values.
- in-process-runtime.test.ts: fake the one real 25ms sleep, drop its inflated
  30s per-test timeout.

Honest note: the timestamp-sleep removals are small absolute wins (the headline
per-file durations were full-suite shard contention, not in-file dead time) but
eliminate the FN-5048 real-wait anti-pattern. workflow-routes.test.ts was
evaluated for splitting and deliberately NOT split — measured A/B showed the
split regressed wall-clock (the file is import/transform-bound, already amortized
by installInMemoryDbSnapshot), so splitting only multiplies fixed import cost.

Verified: core 612/612, dashboard 24/24, engine 78/78; typecheck + eslint clean.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-06-25 22:08:41 -07:00
gsxdsm
b6b5583f01 FN-7039: apply execution-lane models to workflow steps
Route workflow and automation prompt steps through the execution-lane model hierarchy.

- Use executor session model resolution for task workflow prompt steps while preserving per-step overrides.
- Use execution settings model resolution for scheduled and manual AI-prompt automation runs.
- Document the model precedence and add regression coverage plus a patch changeset.

Files changed:
 .changeset/fn-7039-workflow-execution-model.md     |   7 +
 docs/settings-reference.md                         |   2 +
 .../core/src/__tests__/model-resolution.test.ts    |  12 ++
 packages/dashboard/src/routes.ts                   |   6 +-
 .../engine/src/__tests__/executor-test-helpers.ts  |  11 +-
 .../__tests__/executor-workflow-step-model.test.ts | 234 +++++++++++++++++++++
 packages/engine/src/cron-runner.ts                 |   7 +-
 packages/engine/src/executor.ts                    |  23 +-
 8 files changed, 285 insertions(+), 17 deletions(-)

Fusion-Task-Id: FN-7039

Fusion-Task-Lineage: f27c4be8-7793-4212-b9ee-679f50193406
2026-06-25 21:05:33 -07:00
gsxdsm
79c602d9d4 FN-7022: add MCP server configuration foundation
Add core MCP configuration primitives for secure server declarations and resolution.

- Add MCP server setting types, schema entries, validation, and project-over-global resolution.
- Add secret-reference materialization seams plus Claude Desktop import/export helpers.
- Cover MCP config behavior with core unit tests and document settings and secret handling.
- Add a changeset for the published CLI package.

Files changed:
 .changeset/fn-7022-mcp-core-foundation.md      |   7 +
 docs/secrets.md                                |   3 +-
 docs/settings-reference.md                     |  23 ++
 packages/core/src/__tests__/mcp-config.test.ts | 199 ++++++++++++++
 packages/core/src/index.ts                     |  30 +-
 packages/core/src/mcp-config.ts                | 366 +++++++++++++++++++++++++
 packages/core/src/settings-schema.ts           |  90 +++++-
 packages/core/src/settings-validation.ts       | 172 +++++++++++-
 packages/core/src/types.ts                     |  62 +++++
 9 files changed, 947 insertions(+), 5 deletions(-)

Fusion-Task-Id: FN-7022

Fusion-Task-Lineage: 7bafd0b8-e4a5-4bc2-9a2a-43bfb934845c
2026-06-25 21:01:15 -07:00
gsxdsm
8a03e4fc23 feat(core): per-stage column dwell instrumentation
Adds `columnDwellMs?: Record<string, number>` to Task — a per-column
accumulator (column name -> cumulative ms) recorded at the same store
column-transition seam as `cumulativeActiveMs`. On every move it adds
`columnMovedAt(new) - columnMovedAt(prev)` to the bucket for the column
being left, clamped >= 0; unparseable/missing prior timestamps and 0-dwell
moves are skipped, and second visits add to the existing bucket.

Motivation: `cumulativeActiveMs` only measures in-progress time. Diagnosis
of slow tasks showed the dominant wall-clock is *waiting* (queue time in
todo, review wait in in-review), which previously had to be reconstructed
from agent logs. This makes per-stage dwell directly queryable, like
productivity-analytics already consumes cumulativeActiveMs.

Persisted as a JSON-text task column following the v129 workspaceWorktrees
precedent: SCHEMA_SQL column + SCHEMA_VERSION 129->130 + versioned
addColumnIfMissing migration. Additive and behavior-preserving; pre-existing
rows start NULL and accumulate from their next transition. Survives
archive/restore. @fusion/core is private — no changeset.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-06-25 19:39:02 -07:00
gsxdsm
4ea6084322 feat: make Code Review a default-on toggleable optional-group step
Refinement: Code Review is now a DEFAULT-ON but toggleable `optional-group` in the
built-in coding and stepwise coding workflows (defaultOn:true), not a standard
always-on node. It is part of the existing pre-merge flow (execute →
[browser-verification optional] → code-review → review) and runs for every coding
task by default, yet an operator can toggle it off per task by removing `code-review`
from enabledWorkflowSteps; disabled → byte-inert pass-through. Advisory gateMode keeps
it non-blocking (operators can promote to a gate); toolMode readonly.

- Restore the optional-group builder (builtin-code-review-node.ts → -group.ts) with
  config.defaultOn:true; stable group id `code-review`, inner id `code-review-step`.
- Wire the default-on optional-group into both built-in coding IRs.
- Fix store default-workflow seeding: interpreter-deferred built-ins (which carry
  optional-group nodes) previously bailed to `undefined` in
  materializeDefaultWorkflowSteps, dropping default-on group seeding under a
  project-default workflow. Now they seed resolveDefaultOnOptionalGroupIds, mirroring
  the explicit-workflow path, so defaultOn:true actually takes effect (the executor
  enables a group strictly via enabledWorkflowSteps.includes(node.id)).
- Update tests + changeset; full @fusion/core suite green (356 files).

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-06-25 18:16:59 -07:00
gsxdsm
a50074d411 feat: make Code Review a standard always-on pre-merge step
Design correction: Code Review is now a STANDARD, default-ON step in the
built-in coding and stepwise coding workflows — not a default-off optional-group
toggle. It is a regular advisory `prompt` node on the pre-merge success path
(execute → [browser-verification optional] → code-review → review), so it runs
for every coding task with no enabledWorkflowSteps gating. Advisory gateMode means
it does not change merge outcomes; operators can promote it to a blocking gate.

- Replace the optional-group module with a standard prompt-node builder
  (builtin-code-review-group.ts → builtin-code-review-node.ts).
- Keep the `code-review` WORKFLOW_STEP_TEMPLATE in the catalog (editor palette).
- Edges unchanged: code-review → review on success, code-review → end on failure
  (mirrors the existing review node, no dead-end).
- Update tests + changeset for the standard always-on (no-toggle) semantics.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-06-25 17:57:08 -07:00
gsxdsm
7772ab3647 feat: add built-in Code Review pre-merge workflow step
Add a configurable "Code Review" diff-review step to the built-in coding and
stepwise coding workflows as a default-OFF optional-group prompt gate. It reuses
the existing workflow-step machinery and the shared trailing-verdict convention
(REVISE blocks, APPROVE/APPROVE_WITH_NOTES pass) — no engine verification code.

- New `code-review` WORKFLOW_STEP_TEMPLATE (toolMode readonly, gateMode advisory,
  phase pre-merge) focused on the correctness value tests miss: logic bugs, edge
  cases, intent-vs-implementation drift, regressions, error handling, contracts.
- New builtin-code-review-group.ts mirroring builtin-browser-verification-group.ts
  (stable group id `code-review`, distinct inner node id `code-review-step`).
- Wired into builtin-coding-workflow-ir.ts and builtin-stepwise-coding-workflow-ir.ts
  on the pre-merge path next to browser-verification, default OFF / opt-in.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-06-25 17:34:50 -07:00
gsxdsm
6dc8eb7161 perf: snapshot migrated in-memory DB to skip per-test migrations
db.init() replays SCHEMA_SQL + ~129 migrations on every fresh in-memory
DB (~40ms each), which is minutes of pure setup across thousands of
DB-backed tests. Add a test-only migrated-schema snapshot: migrate ONE
in-memory DB per test file, serialize it, and deserialize a fresh copy
per test instead of re-migrating. Each test still gets a brand-new,
fully-isolated in-memory DB; only the migration cost is amortized.

- sqlite-adapter: expose serialize()/deserialize() (node:sqlite + bun)
- db.ts: setInMemoryTemplateSnapshot() hook (test-only, null in prod) +
  serializeSnapshot(); constructor deserializes the snapshot for
  in-memory DBs so init() short-circuits migrate()+compat at v129
- store-test-helpers: install/clearInMemoryDbSnapshot harness
- dashboard: db-snapshot-helper mirror (core __tests__ is cross-package)
- convert agent-store, mission-store, workflow-routes suites

Measured (raw db.init(): 43ms -> 5ms, 8x):
- agent-store      13.12s -> 3.32s
- mission-store    17.62s -> 5.69s (min of 3)
- workflow-routes  tests 4.38s -> 2.79s (min of 5; not init-dominated)

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-06-25 16:48:56 -07:00
gsxdsm
744aa2cc05 feat(engine): scope verification to changed files + scope-aware timeout
Diff-proportional verification (deriveFileScopedPnpmTestCommand) + scope-aware
verification timeout, so merge/step checks finish in seconds. Propagated to this
worktree directly.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-06-25 16:11:45 -07:00
gsxdsm
b891f8f601 FN-6709: document schema version test expectation
Document why the goals schema-version test follows the exported schema constant.

- Add an FNXC note explaining that fresh database version assertions should track SCHEMA_VERSION.
- Preserve the dynamic schema-version expectation so migration bumps do not leave stale literals behind.

Files changed:
 packages/core/src/__tests__/goals-schema.test.ts | 4 ++++
 1 file changed, 4 insertions(+)

Fusion-Task-Id: FN-6709

Fusion-Task-Lineage: 05abc460-0816-4f31-a83c-fb0d3ae427e1
2026-06-25 12:25:13 -07:00
Phil Larson
c808ca8b9f fix(core): export package metadata 2026-06-25 10:50:26 -07:00
gsxdsm
6df4043059 FN-6942: preserve mission workflow selection
Missions now carries the selected header workflow through feature and slice triage so created tasks land in the intended lane.

- Add a reusable header workflow switcher slot and share it between Planning and Missions.
- Thread the selected workflow through mission triage UI, API client calls, routes, and MissionStore task creation.
- Cover mission workflow triage behavior with core, dashboard UI, and route tests.
- Document Missions workflow behavior and add a patch changeset.

Files changed:
 .changeset/fn-6942-mission-workflow-selection.md   |   7 +
 docs/dashboard-guide.md                            |  11 ++
 packages/core/src/__tests__/mission-store.test.ts  | 114 ++++++++++++
 packages/core/src/mission-store.ts                 |   8 +
 packages/dashboard/app/api/legacy.ts               |  10 +-
 .../app/components/HeaderWorkflowSwitcherSlot.tsx  |  99 +++++++++++
 .../dashboard/app/components/MissionManager.tsx    |  23 ++-
 .../components/PlanningWorkflowSwitcherSlot.tsx    |  81 +--------
 .../__tests__/HeaderWorkflowSwitcherSlot.test.tsx  | 124 +++++++++++++
 .../MissionManager.workflow-triage.test.tsx        | 191 +++++++++++++++++++++
 .../app/components/dashboard/MainContent.tsx       |  15 +-
 packages/dashboard/src/mission-routes.ts           |  21 ++-
 .../mission-workflow-triage-route.test.ts          | 149 ++++++++++++++++
 13 files changed, 765 insertions(+), 88 deletions(-)

Fusion-Task-Id: FN-6942

Fusion-Task-Lineage: 53d7b2ea-01cc-4eb6-bdda-988fb684602c
2026-06-25 08:35:44 -07:00
gsxdsm
9fabc9d750 FN-6962: ignore hidden overlap paths by default
Hidden dot paths no longer create file-overlap blockers unless operators opt back into legacy behavior.

- Add the ignoreHiddenOverlapPaths project setting, schema default, API sanitization, and Settings UI toggle.
- Filter hidden dot segments from scheduler, gridlock, and self-healing overlap checks by default while preserving explicit ignore paths.
- Cover default and opt-out behavior across core parity, dashboard settings routes, scheduler, gridlock, and self-healing tests.
- Document the setting and add a patch changeset for the published CLI package.

Files changed:
 .changeset/fn-6962-hidden-overlap-paths.md         |   7 ++
 docs/settings-reference.md                         |   1 +
 .../core/src/__tests__/settings-parity.test.ts     |   7 ++
 packages/core/src/settings-schema.ts               |   1 +
 packages/core/src/types.ts                         |   7 ++
 .../dashboard/app/components/SettingsModal.tsx     |   4 +-
 .../components/__tests__/SettingsModal.test.tsx    |  69 ++++++++++++++
 .../settings/sections/SchedulingSection.tsx        |  10 ++
 .../src/__tests__/routes-settings.test.ts          |  30 ++++++
 packages/dashboard/src/routes.ts                   |   9 ++
 .../src/routes/register-settings-memory-routes.ts  |   6 +-
 .../engine/src/__tests__/gridlock-detector.test.ts |  32 +++++++
 .../__tests__/scheduler-overlap-starvation.test.ts | 102 ++++++++++++++++++++-
 packages/engine/src/__tests__/self-healing.test.ts |  24 +++++
 packages/engine/src/gridlock-detector.ts           |   5 +-
 packages/engine/src/scheduler.ts                   |  40 +++++---
 packages/engine/src/self-healing.ts                |   2 +-
 packages/i18n/locales/en/app.json                  |   2 +
 packages/i18n/locales/es/app.json                  |  11 ++-
 packages/i18n/locales/fr/app.json                  |  11 ++-
 packages/i18n/locales/ko/app.json                  |  11 ++-
 packages/i18n/locales/zh-CN/app.json               |  11 ++-
 packages/i18n/locales/zh-TW/app.json               |  11 ++-
 packages/i18n/src/resources.d.ts                   |   2 +
 24 files changed, 379 insertions(+), 36 deletions(-)

Fusion-Task-Id: FN-6962
Fusion-Task-Lineage: c79120d3-fd9e-439d-b2cf-439f9e2e6952
2026-06-25 08:35:44 -07:00
gsxdsm
ae98ec37a6 FN-7005: close cached plugin store with TaskStore
TaskStore shutdown now tears down its cached plugin store to avoid leaking plugin database handles.

- Dispose the cached PluginStore during TaskStore.close(), clear the cache, and remove listeners before closing.
- Keep close idempotent when no plugin store was created or after a prior teardown.
- Add regression coverage for direct TaskStore.close() and disk-backed harness reopen lifecycle.

Files changed:
 .../src/__tests__/store-plugin-store-close.test.ts | 63 ++++++++++++++++++++++
 packages/core/src/store.ts                         | 15 ++++++
 2 files changed, 78 insertions(+)

Fusion-Task-Id: FN-7005
Fusion-Task-Lineage: fe2242d8-7004-4d29-904d-58ee77861d99
2026-06-25 08:35:44 -07:00
gsxdsm
e42e17023a FN-7003: stabilize core test fixture state
Stabilize @fusion/core tests by resetting stale plugin-store database handles and aligning fixture assertions.

- Add a PluginStore close method that disposes local and central database connections.
- Reset the lazy plugin store before the shared test harness clears global settings storage.
- Cover plugin-store reopening from the built-in workflow harness.
- Assert the runtime FN task-prefix fallback without requiring serialized defaults.

Files changed:
 packages/core/src/__tests__/builtin-workflows.test.ts |  6 ++++++
 packages/core/src/__tests__/store-test-helpers.ts     |  8 ++++++++
 packages/core/src/__tests__/test-project.test.ts      |  8 +++++++-
 packages/core/src/plugin-store.ts                     | 12 ++++++++++++
 4 files changed, 33 insertions(+), 1 deletion(-)

Fusion-Task-Id: FN-7003

Fusion-Task-Lineage: ec4d6e45-61ea-4e6a-b296-3af3acf7ba4b
2026-06-25 08:35:44 -07:00
gsxdsm
f5e1b966ab FN-6943: add worktree file copy settings
Add configurable file-copy seeding for new task worktrees.

- Add the worktreeCopyFiles setting to project settings, schema validation, and dashboard settings UI.
- Copy selected files into acquired worktrees after checkout and record audit events for copied/skipped files.
- Document the new Worktrees setting and cover it with core, dashboard, and engine tests.

Files changed:
 .changeset/fn-6943-worktree-copy-files.md          |   7 +
 docs/dashboard-guide.md                            |   4 +
 docs/settings-reference.md                         |   1 +
 packages/core/src/__tests__/store-settings.test.ts |  24 ++++
 packages/core/src/settings-schema.ts               |   5 +
 packages/core/src/types.ts                         |   7 +
 .../app/__tests__/settings-sections.test.tsx       |  66 +++++++++
 .../dashboard/app/components/SettingsModal.tsx     | 146 ++++++++++++++++++++
 .../components/__tests__/SettingsModal.test.tsx    |  91 +++++++++++++
 .../settings/sections/WorktreesSection.tsx         |  51 ++++++-
 .../src/__tests__/worktree-acquisition.test.ts     |  69 +++++++++-
 .../src/__tests__/worktree-copy-files.test.ts      | 112 ++++++++++++++++
 packages/engine/src/run-audit.ts                   |   6 +
 packages/engine/src/worktree-acquisition.ts        |  32 ++++-
 packages/engine/src/worktree-copy-files.ts         | 147 +++++++++++++++++++++
 15 files changed, 765 insertions(+), 3 deletions(-)

Fusion-Task-Id: FN-6943

Fusion-Task-Lineage: fd1ded06-25f9-4496-8f50-6416446d2f29
2026-06-25 08:34:44 -07:00
gsxdsm
2fb87c9c7a fix(FN-783): separate write-scope intent and repair stale overlap blockers (#1755)
## Summary
- Separates prompt-derived write intent from read-only/context paths for
file-scope classification.
- Preserves true shared/hot-family overlaps while avoiding poisoned
scheduler/near-duplicate signatures.
- Adds store/API/dashboard support to safely repair or reroute stale
`overlapBlockedBy` blockers instead of direct DB/JSON edits.

## Test Plan
- `corepack pnpm --filter @fusion/core exec vitest run
--silent=passed-only --reporter=dot src/__tests__/store-parsing.test.ts
src/__tests__/near-duplicate.test.ts`
- `corepack pnpm --filter @fusion/engine exec vitest run
--silent=passed-only --reporter=dot src/__tests__/triage.test.ts
src/__tests__/scheduler-overlap-starvation.test.ts
src/__tests__/self-healing.test.ts`
- `FUSION_DASHBOARD_DEEP=1 corepack pnpm --filter @fusion/dashboard exec
vitest run --project dashboard-api --silent=passed-only --reporter=dot
src/__tests__/routes-tasks-ops.test.ts`
- `FUSION_DASHBOARD_DEEP=1 corepack pnpm --filter @fusion/dashboard exec
vitest run --project dashboard-app --silent=passed-only --reporter=dot
--exclude "**/build-output.test.ts"
app/components/__tests__/TaskDetailModal.rendering.test.tsx`
- `corepack pnpm --filter @fusion/core typecheck`
- `corepack pnpm --filter @fusion/engine typecheck`
- `corepack pnpm --filter @runfusion/fusion build`

## Notes
- `corepack pnpm --filter @fusion/dashboard typecheck` was attempted
after a clean branch install but failed on dependency-resolution/type
baseline noise (`express`, `@earendil-works/pi-ai`, etc. reported
missing across existing files); targeted dashboard API/app tests passed.

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<!-- This is an auto-generated comment: release notes by coderabbit.ai
-->
## Summary by CodeRabbit

* **New Features**
* Added an end-to-end “repair overlap blocker” action with a new backend
endpoint, dashboard clear-overlap-blocker flow, and legacy API client
support.
* Introduced shared prompt file-scope classification to derive effective
write scopes consistently.
* **Bug Fixes**
* Improved overlap-blocker liveness/recovery by using effective
file-scope overlap analysis with ignore paths.
* Refined overlap-lease eligibility and queued blocker/status clearing
behavior.
* Updated near-duplicate intent signature handling to honor file-scope
constraints.
* **Tests**
* Expanded coverage for file-scope parsing/deduping, overlap-repair
outcomes, and dashboard/modal behavior.
<!-- end of auto-generated comment: release notes by coderabbit.ai -->
2026-06-25 08:30:57 -07:00
gsxdsm
7b46d78c73 fix: align tests with recent source changes on main (#1754)
## Summary

Fixes 6 failing tests on `origin/main` caused by recent feature commits
that landed without updating dependent test assertions. No production
behavior is changed — every fix aligns a test (or build output) with an
intentional source change.

## Changes

| # | Test | Root Cause | Fix |
|---|------|-----------|-----|
| 1 | `packages/core` `test-project.test.ts` | Commit `800f845e1`
changed `DEFAULT_PROJECT_SETTINGS.taskPrefix` from `"FN"` to `undefined`
(prefix now derived from project name at runtime) | Updated assertion to
expect `undefined` |
| 2 | `packages/dashboard` `text-token-canonicalization.test.ts` |
`ScriptsModal.css` used banned `--text-primary` token | Replaced with
canonical `--text` token |
| 3 | `packages/cli` `package-config.test.ts` | Pi runtime deps bumped
from `^0.79.1` to `^0.79.9` | Updated expected version |
| 4 | `packages/cli` `skill-sync.test.ts` | 4 engine tools added but not
documented | Added to `engine-tools.md` |
| 5 | `packages/cli` `version.test.ts` | `release:version` script gained
`run-ci-distill.mjs` | Updated expected script |
| 6 | `packages/cli` `bundled-plugin-freshness.test.ts` | 3 plugins had
stale dist | Rebuilt via `pnpm build` |

## Verification

- `pnpm test:gate` passes (313 core + 58 ci-shape tests)
- `pnpm lint` clean
- All 6 previously-failing tests now pass individually
- Runtime invariant preserved: tasks in fresh projects still get
`FN-NNN` IDs (covered by existing test at `test-project.test.ts:89`)


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2026-06-25 08:27:41 -07:00
Phil Larson
88ccd9081c fix(FN-783): harden overlap repair race handling 2026-06-25 07:57:32 -07:00
Phil Larson
6495875fb8 fix(FN-783): ignore inactive prior overlap blockers 2026-06-25 06:39:56 -07:00
Phil Larson
e8c6a4a36f fix(FN-783): clear missing overlap blocker references 2026-06-25 06:26:40 -07:00
Phil Larson
973e167a9e fix(FN-783): align overlap repair with paused lease state 2026-06-25 05:49:29 -07:00
Phil Larson
7cd660f558 fix(FN-783): address overlap repair review blockers 2026-06-25 05:08:04 -07:00
Phil Larson
8cc5fd895e feat(FN-783): add supported overlap blocker repair API 2026-06-25 03:44:23 -07:00
Phil Larson
53825ad0ab fix(core): prefer explicit file scope for duplicate signatures 2026-06-25 03:44:22 -07:00
Phil Larson
41d1d5b74b feat(FN-783): complete Step 3 — shared write-scope classification
Fusion-Task-Id: FN-783

Co-authored-by: Fusion <noreply@runfusion.ai>
2026-06-25 03:44:21 -07:00
Phil Larson
c8be19f9e6 test(FN-783): cover poisoned write-scope metadata
Fusion-Task-Id: FN-783

Co-authored-by: Fusion <noreply@runfusion.ai>
2026-06-25 03:44:21 -07:00
gsxdsm
bc56ab287e fix: align tests with recent source changes on main
Fix 6 failing tests caused by intentional source changes that landed
without updating dependent test assertions:

- Core test-project: taskPrefix default changed from "FN" to undefined
  (commit 800f845e1, derived from project name at runtime)
- Dashboard ScriptsModal.css: replace banned --text-primary with --text
- CLI package-config: update expected pi dep version ^0.79.1 -> ^0.79.9
- CLI skill-sync: document 4 new engine tools in engine-tools.md
- CLI version: update expected release:version script to include
  run-ci-distill.mjs
- CLI bundled-plugin-freshness: rebuild stale dist directories
2026-06-25 00:13:29 -07:00
gsxdsm
5cd795a3f2 fix(db): use rollback-journal mode for central DB to stop SIGBUS crashes (#1752)
## Summary

Running more than one fusion process on a host (multiple dashboards/CLIs
across worktrees, all attaching `~/.fusion/fusion-central.db`) could
crash a `node` process at random — instantly, with no JS stack and
nothing in the logs. This happened 3 times in 3 days on one machine.
After this change those processes coexist without crashing.

The crash was an OS-level `SIGBUS` (`EXC_BAD_ACCESS`, `FS pagein error`
/ kernel `cluster_pagein past EOF`) inside SQLite's `walIndexReadHdr`.
In WAL mode every connection coordinates through a memory-mapped `-shm`
wal-index; on macOS/APFS, when one process resizes/rebuilds that file
during a checkpoint while another has it mmap'd, the reader faults on
the now-out-of-bounds page. A hardware memory fault can't be caught by
`node:sqlite` or JS, so the whole process dies.

The fix switches the central DB to `journal_mode = DELETE` (rollback
journal), which uses no `-shm` memory map and coordinates cross-process
access via POSIX byte-range locks instead — removing the faulting
surface entirely while keeping multi-process access. The existing
`busy_timeout` absorbs the writer serialization that DELETE mode trades
for WAL's reader/writer concurrency. Per-project DBs (`db.ts`) are
intentionally left on WAL: they're single-process-per-project and don't
hit this cross-process fault. SQLite migrates the existing WAL database
on first open (checkpoints `-wal` into the main file and removes
`-wal`/`-shm`), so there is no data loss.

## Test plan

- New regression tests in `central-db.test.ts` assert the central DB
reports `journal_mode = delete` (not `wal`) and that **no `-shm`
wal-index file is ever created** even after write traffic — i.e. the
exact faulted surface is gone.
- All 6 central-DB suites pass (221 tests); `@fusion/core` typechecks
clean.

---

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Engineering](https://img.shields.io/badge/Built_with-Compound_Engineering-6366f1)](https://github.com/EveryInc/compound-engineering-plugin)
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Code](https://img.shields.io/badge/Opus_4.8_%281M%29-D97757?logo=claude&logoColor=white)


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<!-- This is an auto-generated comment: release notes by coderabbit.ai
-->

## Summary by CodeRabbit

* **Bug Fixes**
* Improved stability when multiple dashboards or CLIs run on the same
machine.
* Switched the local database to a safer journaling mode to reduce rare
crash issues on macOS/APFS.
* Prevented creation of extra database side files during normal
operation, while keeping data durability and lock-based coordination in
place.

<!-- end of auto-generated comment: release notes by coderabbit.ai -->
2026-06-25 00:04:43 -07:00
gsxdsm
079c428af9 chore(release): v0.48.0
Version bump via changesets.
2026-06-24 23:56:23 -07:00
gsxdsm
e53f50eb38 Address PR review feedback (#1752)
- Verify the WAL->DELETE journal-mode switch instead of discarding exec()'s
  result. During a rolling upgrade a lingering WAL holder blocks the exclusive
  lock the switch needs, so SQLite either throws SQLITE_BUSY or no-ops and
  returns "wal". Capture both outcomes and warn loudly so the residual -shm
  SIGBUS surface is observable, rather than silently swallowed.
- Do not rethrow: the condition is transient and self-healing (the next start
  after the last WAL holder exits migrates cleanly); hard-failing would make the
  central DB unopenable during the very upgrade window it describes.
- Add a migration-path regression test (a WAL holder blocking the switch) that
  the prior fresh-DB-only tests did not cover.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-06-24 23:51:52 -07:00
gsxdsm
50a94714ec fix(db): use rollback-journal mode for central DB to stop SIGBUS crashes
The central DB (~/.fusion/fusion-central.db) is opened concurrently by every
fusion process on a host. In WAL mode those connections coordinate through a
memory-mapped `-shm` wal-index; on macOS/APFS a reader takes a SIGBUS
(walIndexReadHdr / `cluster_pagein past EOF`) when another process resizes it
mid-checkpoint, killing the node process with no JS stack or log. Observed 3x
in 3 days. Switch the central DB to journal_mode=DELETE, which uses no `-shm`
mmap and coordinates cross-process access via POSIX byte-range locks instead;
busy_timeout absorbs the added writer serialization. Per-project DBs keep WAL.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-06-24 23:39:35 -07:00
gsxdsm
eb3833a542 FN-6971: retire dual-observe cutover gating
Remove stale dual-observe prerequisites from workflow-authoritative readiness while preserving parity-summary safeguards.

- Require the authoritative flag plus clean populated parity summaries for interpreter cutover readiness.
- Keep persisted workflowInterpreterDualObserve values inert in runtime tests and documentation.
- Update cutover, parity, and graph-executor tests to reflect retired shadow observation behavior.
- Add a formatted patch changeset for the operator-facing cutover readiness fix.

Files changed:
 .changeset/fn-6971-workflow-cutover-readiness.md   |  7 ++
 docs/architecture.md                               |  2 +-
 docs/settings-reference.md                         |  4 +-
 docs/workflow-steps.md                             | 19 +++--
 .../core/src/__tests__/workflow-cutover.test.ts    | 19 +++--
 packages/core/src/workflow-cutover.ts              |  9 +--
 .../workflow-interpreter-cutover.test.ts           | 87 +++++++++++++++++++---
 .../workflow-interpreter-dual-observe.test.ts      | 76 ++++++-------------
 .../src/__tests__/stepwise-workflow-parity.test.ts | 25 ++++---
 .../engine/src/workflow-authoritative-driver.ts    | 10 +--
 10 files changed, 152 insertions(+), 106 deletions(-)

Fusion-Task-Id: FN-6971
Fusion-Task-Lineage: 363a441d-62e5-403c-9389-75fcf788352a
2026-06-24 23:32:52 -07:00
gsxdsm
2ba81c25b4 chore(release): v0.47.0
Version bump via changesets.
2026-06-24 19:32:59 -07:00
gsxdsm
28ceca2cbd Address PR review feedback (#1747)
- core/store: include workspaceWorktrees in the slim and activity-log-limited
  SELECT lists (rowToTask reads it, but the explicit column lists omitted it, so
  slim/limited reads dropped the field and could misclassify workspace tasks);
  add regression tests for both read surfaces
- dashboard/register-git-github: validate caller-supplied repoPath in resolveGitDir
  via isPathWithin containment check (path-traversal hardening for all git
  endpoints); make loadWorkspaceConfig a static @fusion/core import per AGENTS.md
- dashboard/legacy: preserve repoPath in the string-form pullBranch overload
- dashboard/GitManagerModal: revalidate selectedRepo against the fetched repo list
  so a stale selection can't persist across project switches

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-06-24 15:43:12 -07:00
gsxdsm
f06281961e fix(workspace): persist workspaceWorktrees and isolate concurrent session leases
Multiworkspace tasks could not complete due to two independent bugs:

1. task.workspaceWorktrees had no SQLite column / rowToTask mapping, so
   fn_acquire_repo_worktree's updateTask write was dropped on every persist
   (applyTaskPatch writes the DB-round-tripped task back to task.json). Every
   later getTask returned undefined, so fn_task_done's scope verifier read {}
   and blocked with "acquired no sub-repo worktrees", and isWorkspaceTask()
   consumers misfired. Persist it mirroring mergeDetails (schema column + v129
   migration + db-migrate + defineTaskColumn + TaskRow + rowToTask).

2. In workspace mode every task ran rooted at the shared browse-only root, and
   setActiveSession registered that path keyed only by path — so a second
   concurrent workspace task was rejected by the foreign-task guard
   ("active-session path ... is held by ..."). Give each task a task-scoped
   synthetic session key (sessionRegistryPath), applied at all register and
   unregister sites; the in-memory worktree Set still holds the real root.

Regression tests assert the persistence invariant across getTask/listTasks/
store-reopen and concurrent session registration across all three session
surfaces; both verified to fail without the fix.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-06-24 15:13:43 -07:00
gsxdsm
b680948d8c Address PR review feedback (#1746)
- Fix race condition: add request ID guard for stale workspace detection responses
- Guard workspaceMode:true: only persist when repos.length > 0
- Add server-side taskPrefix validation (/^[A-Z]{1,5}$/)
- Move store.init() inside try/finally in both CLI TaskStore lifecycles
- Accept 1-character prefixes in CLI prompt (was requiring >= 2)
- Fix workspaceMode passing: forward false explicitly (was coerced to undefined)
- Fix 3rd KB→FN fallback in distributed-task-id.ts catch block
- Add try/finally to dashboard TaskStore in register-project-routes
- Gate workspace detection on existing-directory mode only (skip clone mode)
2026-06-24 14:24:07 -07:00
gsxdsm
46d0c4a1f6 Address PR review feedback round 3 (#1741)
- Align dashboard prefix validation to 1-5 chars (was 1-10) matching CLI cap
- Fix distributed-task-id.ts fallback from KB to FN (3 occurrences)
- Move taskPrefix/defaultWorkflowId persistence outside interactive-only block
  so non-interactive CLI registration also gets defaults
- Wrap both TaskStore lifecycles in try/finally to guarantee close() on error
2026-06-24 14:08:32 -07:00
gsxdsm
aae76cecc3 Address PR review feedback (#1741)
- Close first TaskStore before creating second in interactive registration (P1)
- Revert defaultWorkflowId default to undefined; set explicitly in onboarding only (P1)
- Add alpha-only filter + 2-char min to interactive prefix input (P2)
- Move suggestTaskPrefix to @fusion/core, share between CLI and dashboard (P2)
- Fix suggestTaskPrefix JSDoc to match implementation (P2)
2026-06-24 10:45:21 -07:00
gsxdsm
9a7c0c6154 fix: fallback task prefix to FN (was KB) when unset
The hardcoded fallback prefix in store.ts was 'KB' (legacy name). Changed
to 'FN' to match the product name and dashboard placeholder.
2026-06-24 10:31:06 -07:00
gsxdsm
800f845e15 feat(workspace): fix auto-detection, derive prefix from name, default coding workflow
- Fix workspace detection: change workspaceMode default from false to
  undefined so isWorkspaceModeExplicitlyDisabled no longer blocks
  auto-detection on fresh projects (config.json was being written with
  workspaceMode:false during store.init(), causing the guard to skip
  detection before it ever ran)
- Derive task prefix from project name (first 2-4 chars) instead of
  hardcoded 'FN' as the suggested default
- Default workflow is now builtin:coding instead of undefined
- CLI registerProjectInteractive: onboarding prompt for task prefix
  confirmation after project name
- Dashboard POST /api/projects: auto-derive prefix and set default
  workflow for new registrations
2026-06-24 10:31:06 -07:00
gsxdsm
c1b5be7d69 fix(workspace): write config.json before workspace.json, validate settings object
Address PR #1739 review round 3:

- Major (coderabbit): Reorder writes so setWorkspaceModeInConfig runs
  before saveWorkspaceConfig. If the config write fails, no stale
  workspace.json is left behind.
- Major (coderabbit): setWorkspaceModeInConfig only treats ENOENT as
  empty config (not parse errors or permission errors). Validates
  settings is a plain object before merging to prevent clobbering.
2026-06-24 09:02:02 -07:00
gsxdsm
11ffca1611 fix(workspace): persist workspaceMode:true in config.json, let save errors propagate
Address PR #1739 review round 2:

- P1 (greptile): Auto-detection fallback now sets workspaceMode: true in
  config.json so the dashboard toggle reflects the actual state.
- Major (coderabbit): Let saveWorkspaceConfig errors propagate instead of
  silently returning 'existing' when the write fails. A failed write would
  leave the project with no git repo and no workspace config.
2026-06-24 08:36:55 -07:00
gsxdsm
42342eff03 fix(workspace): respect explicit workspaceMode:false, improve exclusion test
Address PR #1739 review feedback:

- P1 (greptile): When workspaceMode is explicitly false in config.json,
  skip the auto-detection fallback so toggling workspace mode off via the
  dashboard has a lasting effect (was being re-enabled on next registration).
- CodeRabbit: node_modules exclusion test now includes a real sibling
  sub-repo to prove the exclusion is the gate, not just absence of
  detection.
- Add test for workspaceMode:false config.json guard.
2026-06-24 08:16:36 -07:00
gsxdsm
9aaf911735 feat(workspace): add per-project workspaceMode setting with interactive confirmation
Add workspaceMode as a first-class ProjectSettings boolean that controls
whether the project root is treated as a workspace parent (multi-repo)
or a single git repo.

- ProjectSettings type + DEFAULT_PROJECT_SETTINGS: workspaceMode?: boolean
- CLI registerProjectInteractive: when sub-repos are detected, ask the
  user to confirm workspace mode instead of auto-applying
- TaskStore.updateSettings: when workspaceMode is toggled on, detect
  sub-repos and persist workspace.json; when toggled off, remove it
- Dashboard SettingsModal GeneralSection: workspace mode toggle checkbox

This lets users change workspace mode per-project at any time via the
dashboard Settings or PUT /settings API.
2026-06-24 00:45:24 -07:00
gsxdsm
ff155b9df7 fix(workspace): exclude node_modules from detection, best-effort save
Address PR #1739 review feedback:

- P1: Exclude node_modules, .fusion, .pi from detectWorkspaceRepos so
  packages installed from git sources don't produce false-positive
  workspace members.
- P2: Wrap saveWorkspaceConfig in try/catch so a write failure (permissions,
  disk full) doesn't fail the current registration.
- Nitpick: Thread runner/timeout through detectWorkspaceRepos so custom-runner
  callers are consistent across all code paths.
2026-06-24 00:26:31 -07:00
gsxdsm
cab375a6f8 fix(workspace): detect sub-repos when workspace.json is missing
The initial fix only checked loadWorkspaceConfig, but the dashboard
POST /api/projects and `fn project add` routes never create workspace.json
(only registerProjectInteractive does). So re-adding a workspace project
through the dashboard still triggered git init because the guard saw no
workspace.json.

Add detectWorkspaceRepos as a fallback: after loadWorkspaceConfig and
isInsideGitWorkTree both miss, probe for git sub-repos. If found, persist
workspace.json and return 'existing' without running git init. This covers
all registration surfaces.
2026-06-24 00:16:37 -07:00
gsxdsm
038ac3060b FN-6963: disable tool output log details by default
Agent logs now keep tool timeline rows while requiring an explicit opt-in to persist verbose tool payloads.

- Default persistAgentToolOutput to false in global settings and direct AgentLogger construction.
- Update the settings UI, API expectations, documentation, and changeset to describe opt-in tool payload persistence.
- Adjust engine and dashboard tests for the new default-off behavior while preserving explicit opt-in coverage.

Files changed:
 .changeset/FN-6963-tool-output-default-off.md      |  5 ++++
 docs/settings-reference.md                         |  2 +-
 packages/core/src/settings-schema.ts               |  6 ++++-
 .../components/__tests__/SettingsModal.test.tsx    | 22 +++++++++++++---
 .../settings/sections/GlobalGeneralSection.tsx     |  2 +-
 .../src/__tests__/routes-settings.test.ts          |  4 +--
 packages/engine/src/__tests__/agent-logger.test.ts | 30 ++++++++++++++++++----
 .../src/__tests__/heartbeat-executor.test.ts       |  4 +--
 .../src/__tests__/merger-merge-details.test.ts     |  2 +-
 .../src/__tests__/merger-verification.test.ts      |  2 +-
 .../src/__tests__/step-session-executor.test.ts    |  4 +--
 packages/engine/src/__tests__/triage.test.ts       |  2 +-
 packages/engine/src/agent-logger.ts                |  8 ++++--
 13 files changed, 71 insertions(+), 22 deletions(-)

Fusion-Task-Id: FN-6963

Fusion-Task-Lineage: 7db32871-f539-4a27-a324-02c55ce5bd04
2026-06-23 23:35:33 -07:00