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24 Commits

Author SHA1 Message Date
gsxdsm
3615b0b19d FN-5941: stop todo/in-progress flapping 
Prevent scheduler and self-healing churn from bouncing live tasks between todo and in-progress.

- add dispatch oscillation settings, scheduler settle-window tracking, and auto-pause audit/logging for rapid todo↔in-progress cycles
- harden self-healing against reclaiming genuinely active tasks by checking executor activity, grace windows, and heartbeat runs before requeueing
- cover the new reliability invariants with focused engine tests and document the new diagnostics/settings behavior

Files changed:
 docs/architecture.md                               |   1 +
 docs/diagnostics.md                                |   9 +
 docs/settings-reference.md                         |   3 +
 .../core/src/__tests__/settings-parity.test.ts     |   6 +
 packages/core/src/settings-schema.ts               |   6 +
 packages/core/src/types.ts                         |   9 +
 .../todo-inprogress-flapping.test.ts               | 556 +++++++++++++++++++++
 packages/engine/src/__tests__/scheduler.test.ts    |  14 +-
 .../self-healing-in-progress-limbo.test.ts         |   2 +-
 packages/engine/src/__tests__/self-healing.test.ts |   8 +-
 packages/engine/src/run-audit.ts                   |   8 +
 packages/engine/src/scheduler.ts                   | 113 ++++-
 packages/engine/src/self-healing.ts                | 230 +++++++--
 13 files changed, 928 insertions(+), 37 deletions(-)

Fusion-Task-Id: FN-5941

Fusion-Task-Lineage: babdd85e-d04c-47ca-901c-db692b2874bf
 2026-06-07 18:51:47 -07:00
gsxdsm
866d01f532 FN-5959: bridge task goal provenance from mission links 
Bridge mission-linked task provenance into goal diagnostics.

- derive task goal ids and goal records from the linked mission hierarchy with a task mission fallback
- record provenanceGoalIds in goal-injection diagnostics, run-audit metadata, and executor task logs
- add regression coverage and mission/diagnostics docs for derived task-to-goal provenance

Files changed:
 docs/diagnostics.md                                |   5 +-
 docs/missions.md                                   |  19 ++++
 packages/core/src/__tests__/mission-store.test.ts  | 123 +++++++++++++++++++++
 packages/core/src/mission-store.ts                 |  55 ++++++++-
 packages/engine/src/__tests__/goal-injection-diagnostics-wiring.test.ts      |  35 +++++-
 packages/engine/src/goal-injection-diagnostics.ts  |  21 +++-
 6 files changed, 247 insertions(+), 11 deletions(-)

Fusion-Task-Id: FN-5959

Fusion-Task-Lineage: 7c76ae98-37b1-421c-b477-a0147d034a4c
 2026-06-03 15:32:29 -07:00
gsxdsm
d72cb2ab2b FN-5911: move agent logs to per-task JSONL storage 
Store agent logs in per-task JSONL files instead of the legacy SQLite table.

- add a file-backed agent log store with JSONL append/read/prune helpers and task-scoped source refs
- migrate legacy SQLite agentLogEntries data into task files, rewrite goal citation references, and preserve soft-deleted logs for forensics
- update task store, settings, docs, dashboard route coverage, and add regression tests for migration, retention, and log access

Files changed:
 .changeset/fn-5911-agent-log-jsonl.md              |   5 +
 AGENTS.md                                          |   2 +-
 docs/diagnostics.md                                |   2 +-
 docs/settings-reference.md                         |   2 +
 docs/soft-delete-verification-matrix.md            |   7 +-
 docs/storage.md                                    |   8 +-
 .../src/__tests__/agent-log-file-store.test.ts     | 123 ++++++
 .../core/src/__tests__/agent-log-migration.test.ts | 186 +++++++++
 .../core/src/__tests__/agent-log-retention.test.ts | 208 ++++++++++
 packages/core/src/__tests__/db-migrate.test.ts     |  14 +-
 packages/core/src/__tests__/db.test.ts             |  39 +-
 .../src/__tests__/goal-citations-store.test.ts     |  38 +-
 packages/core/src/__tests__/goals-schema.test.ts   |   2 +-
 packages/core/src/__tests__/insight-store.test.ts  |  10 +-
 .../src/__tests__/merge-request-record.test.ts     |   2 +-
 packages/core/src/__tests__/mission-store.test.ts  |   2 +-
 packages/core/src/__tests__/run-audit.test.ts      |   2 +-
 packages/core/src/__tests__/secrets-schema.test.ts |   6 +-
 .../src/__tests__/soft-delete-agent-logs.test.ts   |  71 ++--
 .../src/__tests__/store-agent-log-file.test.ts     |  91 +++++
 .../core/src/__tests__/store-merge-queue.test.ts   |   2 +-
 packages/core/src/__tests__/store-test-helpers.ts  |  43 +-
 packages/core/src/__tests__/store-upsert.test.ts   |  37 +-
 packages/core/src/__tests__/task-documents.test.ts |   2 +-
 packages/core/src/agent-log-constants.ts           |  25 ++
 packages/core/src/agent-log-file-store.ts          | 267 ++++++++++++
 packages/core/src/db.ts                            |  51 ++-
 packages/core/src/settings-schema.ts               |   1 +
 packages/core/src/store.ts                         | 453 ++++++++++++---------
 packages/core/src/types.ts                         |  10 +-
 .../__tests__/agent-log-routes.integration.test.ts |  48 +++
 .../src/__tests__/evaluator-evidence.test.ts       |  47 ++-
 packages/engine/src/self-healing.ts                |  12 +
 .../src/store/__tests__/roadmap-store.test.ts      |   4 +-
 34 files changed, 1477 insertions(+), 345 deletions(-)

Fusion-Task-Id: FN-5911

Fusion-Task-Lineage: 07c42f3a-87cf-4558-8f01-ac8460b5558b
 2026-06-03 01:10:18 -07:00
gsxdsm
194dfa9387 FN-5758: add cited-goal audit aggregation and runtime route 
Add end-to-end goal-citation audit trail plumbing across core, engine, CLI, and dashboard.

- extend goal citation extraction with aggregation logic and new core coverage
- expose cited-goal runtime data through dashboard routes with dedicated API tests
- wire goal-citation audit details into engine diagnostics and CLI extension audit expectations
- document the new audit behavior and publish a patch changeset for @runfusion/fusion

Files changed:
 .changeset/fn-5758-goal-citation-audit.md          |  9 +++
 docs/dashboard-guide.md                            |  2 +
 docs/diagnostics.md                                |  4 ++
 .../__tests__/extension-goal-tools-audit.test.ts   |  6 +-
 packages/cli/src/extension.ts                      |  3 +
 .../goal-citation-audit-aggregation.test.ts        | 63 ++++++++++++++++++
 packages/core/src/goal-citation-extractor.ts       | 54 ++++++++++++++-
 packages/core/src/index.ts                         |  1 +
 .../src/__tests__/routes-run-cited-goals.test.ts   | 77 ++++++++++++++++++++++
 packages/dashboard/src/routes.ts                   | 11 ++++
 .../src/routes/register-agent-runtime-routes.ts    | 49 ++++++++++++++
 .../src/__tests__/goal-anchoring-audit.test.ts     | 40 +++++++----
 packages/engine/src/goal-anchoring-audit.ts        |  4 ++
 packages/engine/src/goal-injection-diagnostics.ts  |  1 +
 14 files changed, 308 insertions(+), 16 deletions(-)

Fusion-Task-Id: FN-5758

Fusion-Task-Lineage: b077c0b7-6ca4-489d-8c36-73d80a2afdb2
 2026-05-30 22:53:24 -07:00
gsxdsm
d98ff8780c FN-5759: inject active-goal context across engine lanes 
Enable always-on active-goal prompt injection and diagnostic wiring across triage/executor flows.

- Refactor goal-context injection so agent heartbeat, executor, and triage all apply the active-goal seam consistently.
- Extend goal injection diagnostics implementation and exports, plus anchoring audit touchpoints.
- Add and update tests for goal context injection behavior and diagnostics wiring.
- Update architecture and diagnostics docs to describe the new always-on seam.

Files changed:
 docs/architecture.md                               |  2 +-
 docs/diagnostics.md                                |  2 +-
 .../src/__tests__/goal-context-injection.test.ts   | 19 ++++-
 .../goal-injection-diagnostics-wiring.test.ts      | 98 +++++++++++++++++++++-
 packages/engine/src/agent-heartbeat.ts             | 31 ++-----
 packages/engine/src/executor.ts                    | 32 ++-----
 packages/engine/src/goal-anchoring-audit.ts        |  2 +-
 packages/engine/src/goal-injection-diagnostics.ts  | 42 +++++++++-
 packages/engine/src/index.ts                       |  2 +
 packages/engine/src/triage.ts                      | 28 +++++--
 10 files changed, 191 insertions(+), 67 deletions(-)

Fusion-Task-Id: FN-5759

Fusion-Task-Lineage: 1419de34-2e86-4459-bcd4-426f15c067fe
 2026-05-30 21:54:06 -07:00
gsxdsm
ee0b1cd9c8 FN-5658: add goal injection visibility diagnostics 
Improve anchoring visibility by classifying and emitting goal-injection diagnostics across engine lanes.

- add goal-injection diagnostics module with result/failure classification and audit emission helpers
- wire heartbeat and executor prompt construction to resolve classified goal context and emit diagnostic events
- expose diagnostic APIs from engine index and add new run-audit event type for prompt goal injection
- add unit and wiring tests plus diagnostics docs updates for the new observability path

Files changed:
 docs/diagnostics.md                                |   8 +
 .../goal-injection-diagnostics-wiring.test.ts      |  87 +++++++++
 .../__tests__/goal-injection-diagnostics.test.ts   | 150 +++++++++++++++
 packages/engine/src/agent-heartbeat.ts             |  34 +++-
 packages/engine/src/executor.ts                    |  35 +++-
 packages/engine/src/goal-injection-diagnostics.ts  | 209 +++++++++++++++++++++
 packages/engine/src/index.ts                       |  10 +
 packages/engine/src/run-audit.ts                   |   7 +-
 8 files changed, 521 insertions(+), 19 deletions(-)

Fusion-Task-Id: FN-5658

Fusion-Task-Lineage: f4feaa37-d9b1-4bb6-b8c9-35a9b7a02f57
 2026-05-29 20:50:08 -07:00
gsxdsm
ba6b41f533 chore(engine): remove triage broad-scope heuristics 
Removes the BROAD_SCOPE_FLAG_VERSION/decideBroadScopeFlag pipeline,
the triage.ts call site that wrote `broadScopeFlag` source metadata
and emitted task:broad-scope-flagged-at-triage audit events, the
DatabaseMutationType enum entry, the diagnostic doc section, and the
associated unit + reliability-interaction tests.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
 2026-05-23 03:08:41 -07:00
gsxdsm
76bd3a7d90 feat(FN-5205): add workflow-step test mode dispatch and routing for mock pr 
Implements workflow step test mode (FN-5205) by wiring mock dispatch, context forwarding, and routing through executor, merger, and mock provider, plus adding corresponding tests and docs. Also adds broad-scope triage heuristics to improve task-scope detection, touching triage.ts, triage-broad-scope

Fusion-Task-Id: FN-5205

Co-authored-by: Fusion (runfusion.ai) <noreply@runfusion.ai>
Fusion-Task-Id: FN-5205
 2026-05-23 02:25:00 -07:00
gsxdsm
2a3a07a612 feat(FN-5403): merge fusion/fn-5403 2026-05-22 23:12:49 -07:00
Fusion (runfusion.ai)
4cbdd157c5 feat(FN-5469): add useAgentLogs resume instrumentation and test coverage 
Added resume instrumentation to the `useAgentLogs` hook (`packages/dashboard/app/hooks/useAgentLogs.ts`) with test coverage and diagnostics documentation. The new test file is included in the dashboard test gate via `vitest.config.ts`.

Fusion-Task-Id: FN-5469
 2026-05-21 20:06:48 -07:00
Fusion (runfusion.ai)
a8715ed963 fix(FN-5335): enforce triple-proof gating for backward recovery 
- Gate self-healing backward moves behind audited triple-proof predicates across reclaim paths
- Skip reclaim-pr-conflict mutations when proof checks fail and preserve no-action behavior
- Add broad unit and reliability-interaction coverage for triple-proof and cross-layer scenarios
- Document backward-move stage invariants, diagnostics, and add delivery changeset for @runfusion/fusion
 2026-05-21 19:15:27 -07:00
Fusion (runfusion.ai)
854045f430 feat(FN-5416): instrument SSE stream resume events across PR checks, dev-se 
Adds structured stream-resume instrumentation to the dashboard across four SSE hooks (PR checks, dev-server logs, research, background sessions), wiring `[wake-trigger-diagnostics]` log markers and view-resume route guards so the engine can distinguish cold starts from resume paths; includes tests f

Fusion-Task-Id: FN-5416
 2026-05-21 18:15:26 -07:00
Fusion (runfusion.ai)
c04442f6ea feat(FN-5415): wire visibility resume emissions in board hooks and add test 
Adds visibility resume emissions to the four managed state hooks (`useMeshState`, `useNodes`, `useProjects`, `useManagedDockerNodes`) and establishes corresponding instrumentation test coverage, with a documentation update to the diagnostics reference covering board hook telemetry.

Fusion-Task-Id: FN-5415
 2026-05-21 16:09:53 -07:00
Fusion (runfusion.ai)
b8147dd3b1 feat(FN-5405): remove broad-scope triage heuristics and UI advisory chips/b 
Removes the broad-scope detection feature end-to-end: the TaskCard chip and TaskDetailModal advisory banner are gone from the dashboard, the triage heuristic that flagged tasks as broad-scope has been deleted from the engine along with its associated run-audit events, and documentation references ha

Fusion-Task-Id: FN-5405
 2026-05-21 15:07:15 -07:00
Fusion (runfusion.ai)
f798378693 feat(FN-5346): add post-completion defensive backstop and shared reconcile 
The merge adds a post-completion defensive backstop that probes and removes stale same-task `activeSessionRegistry` entries on `done`/`archived` transitions, completing FN-5346 with a shared reconcile helper, a defensive ownership probe wired into paused cleanup, audit event alignment, and regressio

Fusion-Task-Id: FN-5346
 2026-05-20 21:53:02 -07:00
Fusion (runfusion.ai)
1913cb59fe feat(FN-5389): add resume event instrumentation with SSE, hooks, and diagno 
FN-5389 adds dashboard resume event instrumentation: a `resumeInstrumentation` utility captures SSE resume signals, wired through `useChat`, `useChatRooms`, and `useTasks` hooks, with remount markers in `Board` and `ChatView`; diagnostics routes expose resume events for observability, documented in

Fusion-Task-Id: FN-5389
 2026-05-20 19:58:49 -07:00
Fusion (runfusion.ai)
c60045df22 feat(FN-5223): anchor staleness and stall detectors to engine activation ti 
The merge introduces an engine-activation timestamp as the staleness floor for task age calculations, replacing arbitrary wall-clock thresholds with a runtime-relative anchor. Step 1 adds settings defaults, Steps 2–4 wire the floor helper through project engine, in-process runtime, and task store hy

Fusion-Task-Id: FN-5223
 2026-05-20 14:29:07 -07:00
Fusion (runfusion.ai)
6fb4b9ee47 feat(FN-5362): add heartbeat executor sparse-cache reports-health diagnosti 
The merge fixes a stale cache-miss path in the heartbeat executor and adds `reports-health` diagnostics for cache-state reporting, with a regression test covering a sparse-cache false-positive scenario. It also adds a two-line tweak to the merger and updates the diagnostics documentation.

Fusion-Task-Id: FN-5362
 2026-05-20 14:28:45 -07:00
Fusion (runfusion.ai)
37d4115bb6 feat(FN-5231): detect and flag broad-scope tasks at triage to prompt scope 
- docs(FN-5231): complete Step 6 — AGENTS.md + delivery summary + dashboard follow-up
- test(FN-5231): complete Step 5 — verification gates green
- test(FN-5231): complete Step 4 — reliability interaction regression for broad-scope flag
- feat(FN-5231): complete Step 3 — wire broad-scope flag into finalizeApprovedTask
- feat(FN-5231): complete Step 2 — register broad-scope audit event type
- feat(FN-5231): complete Step 1 — broad-scope heuristic helper

Fusion-Task-Id: FN-5231
 2026-05-20 05:28:36 -07:00
Fusion (runfusion.ai)
c48f9cbcad docs(FN-5189): add process supervision guidance 
Fusion-Task-Id: FN-5189
Fusion-Task-Lineage: 4caa3f0a-af81-4c60-88e8-de229ed72e08
 2026-05-19 17:19:03 -07:00
Fusion (runfusion.ai)
dac2ebbbf3 fix(FN-5168): stabilize cli worktree root test timeout 
Fusion-Task-Id: FN-5168
Fusion-Task-Lineage: 0c865d3e-0886-4e51-a7ff-cb4c713dcc54
 2026-05-19 16:15:25 -07:00
Fusion (runfusion.ai)
41c243880a docs(FN-5093): complete Step 6 — document in-review-stalled detector 
Fusion-Task-Id: FN-5093
Fusion-Task-Lineage: fe96617a-88f8-4a3c-b96c-c516d2206331
 2026-05-19 03:54:49 -07:00
Fusion (runfusion.ai)
20e1bb9d25 feat(FN-5091): complete Step 6 — document dependency blocked backlog health 
Fusion-Task-Id: FN-5091
Fusion-Task-Lineage: f59dc7dd-abc2-4d1d-a755-1fe446314131
 2026-05-19 03:21:17 -07:00
gsxdsm
6c1732d234 feat(FN-5076): merge fusion/fn-5076 2026-05-18 14:46:20 -07:00