feat(FN-1228): complete Step 1 — Backend API Routes modifications

- Modified POST /api/nodes to make type optional (defaults to 'remote')
- Changed DELETE /api/nodes/:id to return 204 No Content
- Updated GET /api/nodes/:id/metrics to return SystemMetrics from node.systemMetrics
- Added GET /api/mesh/state route for full mesh topology state

.fusion/memory.md

@@ -73,3 +73,10 @@
 - When checking if a CSS value is inside a `@media` block, don't just search backwards for the nearest `@media` — track brace depth to confirm the line is actually between the block's opening `{` and closing `}`. Many component styles are defined globally (not in media queries) even though they visually only appear on mobile.
 - Regex tests using `[\s\S]*` (greedy match across lines) to check CSS rules inside `@media` blocks are unreliable — they can match across block boundaries. Use non-greedy `[^}]*` scoped to a single rule block instead.
 - Touch target sizing in `styles.css` mobile media queries uses 36px (reduced from the original 44px). The `.touch-target` opt-in utility class remains at 44px. Comments mentioning "44px" in the mobile sections have been updated to reflect the actual values.
+
+## TUI Package Testing
+
+- The `@fusion/tui` package uses `ink`'s `render` function for testing, not `@testing-library/react`. Use `setTimeout(resolve, ms)` to wait for async operations in tests.
+- When mocking `useFusion` in TUI tests, use `vi.mock("../fusion-context.js", ...)` to intercept the import.
+- For EventEmitter mocking in TUI tests, create mock objects with `Object.create(EventEmitter.prototype)` and add methods like `listTasks` or `getActivityLog`.
+- Ink's render function captures errors but doesn't throw them — use `expect(() => instance.unmount()).not.toThrow()` pattern for error-handling tests.

packages/core/src/db.ts

@@ -367,6 +367,7 @@ CREATE TABLE IF NOT EXISTS mission_events (
   description TEXT NOT NULL,
   metadata TEXT,
   timestamp TEXT NOT NULL,
+  seq INTEGER NOT NULL DEFAULT 0,
   FOREIGN KEY (missionId) REFERENCES missions(id) ON DELETE CASCADE
 );
 CREATE INDEX IF NOT EXISTS idxMissionEventsMissionId ON mission_events(missionId);
@@ -850,6 +851,17 @@ export class Database {
         this.db.exec(`CREATE INDEX IF NOT EXISTS idxChatMessagesCreatedAt ON chat_messages(createdAt)`);
       });
     }
+
+    if (version < 23) {
+      this.applyMigration(23, () => {
+        this.addColumnIfMissing("milestones", "planningNotes", "TEXT");
+        this.addColumnIfMissing("milestones", "verification", "TEXT");
+        this.addColumnIfMissing("slices", "planningNotes", "TEXT");
+        this.addColumnIfMissing("slices", "verification", "TEXT");
+        this.addColumnIfMissing("slices", "planState", "TEXT NOT NULL DEFAULT 'not_started'");
+        this.addColumnIfMissing("mission_events", "seq", "INTEGER NOT NULL DEFAULT 0");
+      });
+    }
   }
 
   /**

packages/core/src/mission-store.ts

@@ -103,8 +103,15 @@ export class MissionStore extends EventEmitter<MissionStoreEvents> {
   ) {
     super();
     this.setMaxListeners(100);
+    // Initialize sequence counter from existing events to ensure uniqueness across restarts
+    const lastEvent = this.db.prepare(`
+      SELECT seq FROM mission_events ORDER BY seq DESC LIMIT 1
+    `).get() as { seq?: number } | undefined;
+    this._eventSeq = lastEvent?.seq ?? 0;
   }
 
+  private _eventSeq = 0;
+
   // ── Row-to-Object Converters ───────────────────────────────────────
 
   /**
@@ -189,6 +196,7 @@ export class MissionStore extends EventEmitter<MissionStoreEvents> {
       description: row.description,
       metadata: fromJson<Record<string, unknown>>(row.metadata) ?? null,
       timestamp: row.timestamp,
+      seq: row.seq ?? 0,
     };
   }
 
@@ -469,7 +477,7 @@ export class MissionStore extends EventEmitter<MissionStoreEvents> {
       SELECT missionId, timestamp, description
       FROM mission_events
       WHERE eventType = 'error'
-      ORDER BY timestamp DESC, id DESC
+      ORDER BY seq DESC, id DESC
     `).all() as Array<{ missionId: string; timestamp: string; description: string }>;
     // Only keep the first (latest) error per missionId
     const lastErrorByMission = new Map<string, { timestamp: string; description: string }>();
@@ -603,11 +611,12 @@ export class MissionStore extends EventEmitter<MissionStoreEvents> {
       description,
       metadata: metadata ?? null,
       timestamp: new Date().toISOString(),
+      seq: ++this._eventSeq,
     };
 
     this.db.prepare(`
-      INSERT INTO mission_events (id, missionId, eventType, description, metadata, timestamp)
-      VALUES (?, ?, ?, ?, ?, ?)
+      INSERT INTO mission_events (id, missionId, eventType, description, metadata, timestamp, seq)
+      VALUES (?, ?, ?, ?, ?, ?, ?)
     `).run(
       event.id,
       event.missionId,
@@ -615,6 +624,7 @@ export class MissionStore extends EventEmitter<MissionStoreEvents> {
       event.description,
       toJsonNullable(event.metadata),
       event.timestamp,
+      event.seq,
     );
 
     this.db.bumpLastModified();
@@ -726,7 +736,7 @@ export class MissionStore extends EventEmitter<MissionStoreEvents> {
       SELECT timestamp, description
       FROM mission_events
       WHERE missionId = ? AND eventType = 'error'
-      ORDER BY timestamp DESC, id DESC
+      ORDER BY seq DESC, id DESC
       LIMIT 1
     `).get(missionId) as { timestamp: string; description: string } | undefined;
 

packages/core/src/mission-types.ts

@@ -73,6 +73,8 @@ export interface MissionEvent {
   description: string;
   metadata: Record<string, unknown> | null;
   timestamp: string;
+  /** Monotonically increasing sequence number for ordering events with identical timestamps */
+  seq: number;
 }
 
 /** Computed mission health snapshot used by observability APIs. */

packages/dashboard/app/components/MissionManager.tsx

@@ -588,6 +588,14 @@ export function MissionManager({ isOpen, isInline = false, onClose, addToast, pr
       void loadMissionHealth(missions);
     };
 
+    const handleFeatureUpdated = () => {
+      refreshHealth();
+      // Reload the selected mission detail to reflect updated feature status
+      if (selectedMission) {
+        void loadMissionDetail(selectedMission.id);
+      }
+    };
+
     const handleMissionEvent = (rawEvent: Event) => {
       refreshHealth();
 
@@ -634,13 +642,13 @@ export function MissionManager({ isOpen, isInline = false, onClose, addToast, pr
 
     eventSource.addEventListener("mission:updated", refreshHealth);
     eventSource.addEventListener("slice:updated", refreshHealth);
-    eventSource.addEventListener("feature:updated", refreshHealth);
+    eventSource.addEventListener("feature:updated", handleFeatureUpdated);
     eventSource.addEventListener("mission:event", handleMissionEvent);
 
     return () => {
       eventSource.removeEventListener("mission:updated", refreshHealth);
       eventSource.removeEventListener("slice:updated", refreshHealth);
-      eventSource.removeEventListener("feature:updated", refreshHealth);
+      eventSource.removeEventListener("feature:updated", handleFeatureUpdated);
       eventSource.removeEventListener("mission:event", handleMissionEvent);
       eventSource.close();
     };
@@ -649,6 +657,7 @@ export function MissionManager({ isOpen, isInline = false, onClose, addToast, pr
     eventsFilter,
     isActive,
     isActivityScrolledNearBottom,
+    loadMissionDetail,
     loadMissionHealth,
     missions,
     projectId,

packages/dashboard/app/components/__tests__/MissionManager.test.tsx

@@ -762,6 +762,53 @@ describe("MissionManager", () => {
     });
   });
 
+  it("reloads selected mission detail when feature:updated SSE event arrives", async () => {
+    const fetchMock = createDetailFetchMock(mockMissionEvents);
+    globalThis.fetch = fetchMock;
+    globalThis.EventSource = MockEventSource as unknown as typeof globalThis.EventSource;
+
+    render(<MissionManager isOpen={true} onClose={vi.fn()} addToast={vi.fn()} />);
+
+    await waitFor(() => {
+      expect(screen.getByText("Build Auth System")).toBeDefined();
+    });
+
+    // Click on the mission to open detail view
+    fireEvent.click(screen.getByText("Build Auth System"));
+
+    await waitFor(() => {
+      // Back button should appear in detail view
+      expect(screen.getByTestId("mission-back-btn")).toBeDefined();
+    });
+
+    // Record initial fetch calls for mission detail
+    const initialFetchCount = fetchMock.mock.calls.filter(
+      (call) => typeof call[0] === "string" && call[0].includes("/api/missions/M-001")
+    ).length;
+    expect(initialFetchCount).toBeGreaterThan(0);
+
+    // Emit a feature:updated SSE event
+    await act(async () => {
+      for (const source of MockEventSource.instances) {
+        source.emit("feature:updated", {
+          featureId: "F-001",
+          missionId: "M-001",
+          sliceId: "SL-001",
+          previousStatus: "triaged",
+          newStatus: "in-progress",
+        });
+      }
+    });
+
+    // Verify mission detail was reloaded (fetch was called again for the mission)
+    await waitFor(() => {
+      const updatedFetchCount = fetchMock.mock.calls.filter(
+        (call) => typeof call[0] === "string" && call[0].includes("/api/missions/M-001")
+      ).length;
+      expect(updatedFetchCount).toBeGreaterThan(initialFetchCount);
+    });
+  });
+
   it("shows empty state when no missions exist", async () => {
     globalThis.fetch = vi.fn().mockResolvedValue(mockApiResponse([]));
     render(<MissionManager isOpen={true} onClose={vi.fn()} addToast={vi.fn()} />);

packages/engine/src/runtimes/in-process-runtime.test.ts

@@ -61,6 +61,7 @@ vi.mock("../scheduler.js", async () => {
       const self = {} as Record<string, unknown>;
       self.start = vi.fn();
       self.stop = vi.fn();
+      self.reconcileAllMissionFeatures = vi.fn().mockResolvedValue(0);
       return self;
     }),
   };

packages/engine/src/runtimes/in-process-runtime.ts

@@ -345,6 +345,11 @@ export class InProcessRuntime
         void activeMissionAutopilot.recoverMissions(activeMissionStore);
       }
 
+      // 11. Reconcile feature status for all active missions (not just autopilot)
+      if (activeMissionStore) {
+        void this.scheduler.reconcileAllMissionFeatures();
+      }
+
       this.setStatus("active");
       runtimeLog.log(`InProcessRuntime started for project ${this.config.projectId}`);
     } catch (error) {

packages/engine/src/scheduler.test.ts

@@ -2,7 +2,7 @@ import { describe, it, expect, vi, beforeEach } from "vitest";
 import type { PrMonitor } from "./pr-monitor.js";
 import { Scheduler, pathsOverlap } from "./scheduler.js";
 import { AgentSemaphore } from "./concurrency.js";
-import type { TaskStore, Task } from "@fusion/core";
+import type { TaskStore, Task, Column } from "@fusion/core";
 import { existsSync } from "node:fs";
 import { readFile } from "node:fs/promises";
 
@@ -24,10 +24,11 @@ vi.mock("node:fs/promises", async (importOriginal) => {
 });
 
 // Helper to create mock tasks
-function createMockTask(overrides: Partial<Task> = {}): Task {
+function createMockTask(overrides: Partial<Task & { prompt?: string }> = {}): Task {
   return {
     id: "FN-001",
     description: "Test task",
+    prompt: "Test prompt",
     column: "todo",
     dependencies: [],
     steps: [],
@@ -1749,4 +1750,323 @@ describe("Scheduler", () => {
       expect(mockAutopilot.handleTaskCompletion).toHaveBeenCalledWith("FN-001");
     });
   });
+
+  describe("reconcileAllMissionFeatures", () => {
+    it("returns early when missionStore is not provided", async () => {
+      const store = createMockStore();
+      const scheduler = new Scheduler(store);
+
+      const result = await scheduler.reconcileAllMissionFeatures();
+
+      expect(result).toBe(0);
+    });
+
+    it("skips non-active missions", async () => {
+      const store = createMockStore();
+      const mockMissionStore = createMockMissionStore({
+        listMissions: vi.fn().mockReturnValue([
+          { id: "M-001", status: "complete" },
+          { id: "M-002", status: "archived" },
+        ]),
+        getMissionWithHierarchy: vi.fn(),
+      });
+
+      const scheduler = new Scheduler(store, {
+        missionStore: mockMissionStore as any,
+      });
+
+      await scheduler.reconcileAllMissionFeatures();
+
+      expect(mockMissionStore.getMissionWithHierarchy).not.toHaveBeenCalled();
+    });
+
+    it("updates feature to in-progress when task is in-progress and feature is triaged", async () => {
+      const store = createMockStore({
+        getTask: vi.fn().mockResolvedValue(createMockTask({ id: "FN-001", column: "in-progress" as Column })),
+      });
+      const mockMissionStore = createMockMissionStore({
+        listMissions: vi.fn().mockReturnValue([
+          { id: "M-001", status: "active" },
+        ]),
+        getMissionWithHierarchy: vi.fn().mockReturnValue({
+          id: "M-001",
+          status: "active",
+          milestones: [{
+            id: "MS-001",
+            slices: [{
+              id: "SL-001",
+              status: "active",
+              features: [{
+                id: "F-001",
+                taskId: "FN-001",
+                status: "triaged",
+              }],
+            }],
+          }],
+        }),
+        updateFeatureStatus: vi.fn(),
+      });
+
+      const scheduler = new Scheduler(store, {
+        missionStore: mockMissionStore as any,
+      });
+
+      const result = await scheduler.reconcileAllMissionFeatures();
+
+      expect(mockMissionStore.updateFeatureStatus).toHaveBeenCalledWith("F-001", "in-progress");
+      expect(result).toBe(1);
+    });
+
+    it("updates feature to done when task is done and feature is not done", async () => {
+      const store = createMockStore({
+        getTask: vi.fn().mockResolvedValue(createMockTask({ id: "FN-001", column: "done" as Column })),
+      });
+      const mockMissionStore = createMockMissionStore({
+        listMissions: vi.fn().mockReturnValue([
+          { id: "M-001", status: "active" },
+        ]),
+        getMissionWithHierarchy: vi.fn().mockReturnValue({
+          id: "M-001",
+          status: "active",
+          milestones: [{
+            id: "MS-001",
+            slices: [{
+              id: "SL-001",
+              status: "active",
+              features: [{
+                id: "F-001",
+                taskId: "FN-001",
+                status: "in-progress",
+              }],
+            }],
+          }],
+        }),
+        updateFeatureStatus: vi.fn(),
+      });
+
+      const scheduler = new Scheduler(store, {
+        missionStore: mockMissionStore as any,
+      });
+
+      const result = await scheduler.reconcileAllMissionFeatures();
+
+      expect(mockMissionStore.updateFeatureStatus).toHaveBeenCalledWith("F-001", "done");
+      expect(result).toBe(1);
+    });
+
+    it("updates feature to triaged when task moves back to todo and feature is in-progress", async () => {
+      const store = createMockStore({
+        getTask: vi.fn().mockResolvedValue(createMockTask({ id: "FN-001", column: "todo" as Column })),
+      });
+      const mockMissionStore = createMockMissionStore({
+        listMissions: vi.fn().mockReturnValue([
+          { id: "M-001", status: "active" },
+        ]),
+        getMissionWithHierarchy: vi.fn().mockReturnValue({
+          id: "M-001",
+          status: "active",
+          milestones: [{
+            id: "MS-001",
+            slices: [{
+              id: "SL-001",
+              status: "active",
+              features: [{
+                id: "F-001",
+                taskId: "FN-001",
+                status: "in-progress",
+              }],
+            }],
+          }],
+        }),
+        updateFeatureStatus: vi.fn(),
+      });
+
+      const scheduler = new Scheduler(store, {
+        missionStore: mockMissionStore as any,
+      });
+
+      const result = await scheduler.reconcileAllMissionFeatures();
+
+      expect(mockMissionStore.updateFeatureStatus).toHaveBeenCalledWith("F-001", "triaged");
+      expect(result).toBe(1);
+    });
+
+    it("does not update correctly synced features", async () => {
+      const store = createMockStore({
+        getTask: vi.fn().mockResolvedValue(createMockTask({ id: "FN-001", column: "in-progress" as Column })),
+      });
+      const mockMissionStore = createMockMissionStore({
+        listMissions: vi.fn().mockReturnValue([
+          { id: "M-001", status: "active" },
+        ]),
+        getMissionWithHierarchy: vi.fn().mockReturnValue({
+          id: "M-001",
+          status: "active",
+          milestones: [{
+            id: "MS-001",
+            slices: [{
+              id: "SL-001",
+              status: "active",
+              features: [{
+                id: "F-001",
+                taskId: "FN-001",
+                status: "in-progress", // Already synced
+              }],
+            }],
+          }],
+        }),
+        updateFeatureStatus: vi.fn(),
+      });
+
+      const scheduler = new Scheduler(store, {
+        missionStore: mockMissionStore as any,
+      });
+
+      const result = await scheduler.reconcileAllMissionFeatures();
+
+      expect(mockMissionStore.updateFeatureStatus).not.toHaveBeenCalled();
+      expect(result).toBe(0);
+    });
+
+    it("skips features without taskId", async () => {
+      const store = createMockStore({
+        getTask: vi.fn(),
+      });
+      const mockMissionStore = createMockMissionStore({
+        listMissions: vi.fn().mockReturnValue([
+          { id: "M-001", status: "active" },
+        ]),
+        getMissionWithHierarchy: vi.fn().mockReturnValue({
+          id: "M-001",
+          status: "active",
+          milestones: [{
+            id: "MS-001",
+            slices: [{
+              id: "SL-001",
+              status: "active",
+              features: [{
+                id: "F-001",
+                taskId: undefined, // No linked task
+                status: "defined",
+              }],
+            }],
+          }],
+        }),
+        updateFeatureStatus: vi.fn(),
+      });
+
+      const scheduler = new Scheduler(store, {
+        missionStore: mockMissionStore as any,
+      });
+
+      const result = await scheduler.reconcileAllMissionFeatures();
+
+      expect(store.getTask).not.toHaveBeenCalled();
+      expect(mockMissionStore.updateFeatureStatus).not.toHaveBeenCalled();
+      expect(result).toBe(0);
+    });
+
+    it("skips inactive slices", async () => {
+      const store = createMockStore({
+        getTask: vi.fn(),
+      });
+      const mockMissionStore = createMockMissionStore({
+        listMissions: vi.fn().mockReturnValue([
+          { id: "M-001", status: "active" },
+        ]),
+        getMissionWithHierarchy: vi.fn().mockReturnValue({
+          id: "M-001",
+          status: "active",
+          milestones: [{
+            id: "MS-001",
+            slices: [{
+              id: "SL-001",
+              status: "pending", // Not active
+              features: [{
+                id: "F-001",
+                taskId: "FN-001",
+                status: "triaged",
+              }],
+            }],
+          }],
+        }),
+        updateFeatureStatus: vi.fn(),
+      });
+
+      const scheduler = new Scheduler(store, {
+        missionStore: mockMissionStore as any,
+      });
+
+      const result = await scheduler.reconcileAllMissionFeatures();
+
+      expect(store.getTask).not.toHaveBeenCalled();
+      expect(mockMissionStore.updateFeatureStatus).not.toHaveBeenCalled();
+      expect(result).toBe(0);
+    });
+
+    it("handles multiple features across multiple missions and slices", async () => {
+      const store = createMockStore({
+        getTask: vi.fn((id: string) => {
+          const columns: Record<string, Column> = {
+            "FN-001": "in-progress",
+            "FN-002": "done",
+            "FN-003": "triage",
+          };
+          return Promise.resolve(createMockTask({ id, column: columns[id] || "todo" }));
+        }),
+      });
+      const mockMissionStore = createMockMissionStore({
+        listMissions: vi.fn().mockReturnValue([
+          { id: "M-001", status: "active" },
+          { id: "M-002", status: "active" },
+        ]),
+        getMissionWithHierarchy: vi.fn((id: string) => {
+          if (id === "M-001") {
+            return {
+              id: "M-001",
+              status: "active",
+              milestones: [{
+                id: "MS-001",
+                slices: [{
+                  id: "SL-001",
+                  status: "active",
+                  features: [
+                    { id: "F-001", taskId: "FN-001", status: "triaged" }, // Should update to in-progress
+                    { id: "F-002", taskId: "FN-002", status: "in-progress" }, // Should update to done
+                  ],
+                }],
+              }],
+            };
+          }
+          return {
+            id: "M-002",
+            status: "active",
+            milestones: [{
+              id: "MS-002",
+              slices: [{
+                id: "SL-002",
+                status: "active",
+                features: [
+                  { id: "F-003", taskId: "FN-003", status: "in-progress" }, // Should update to triaged
+                ],
+              }],
+            }],
+          };
+        }),
+        updateFeatureStatus: vi.fn(),
+      });
+
+      const scheduler = new Scheduler(store, {
+        missionStore: mockMissionStore as any,
+      });
+
+      const result = await scheduler.reconcileAllMissionFeatures();
+
+      expect(mockMissionStore.updateFeatureStatus).toHaveBeenCalledTimes(3);
+      expect(mockMissionStore.updateFeatureStatus).toHaveBeenCalledWith("F-001", "in-progress");
+      expect(mockMissionStore.updateFeatureStatus).toHaveBeenCalledWith("F-002", "done");
+      expect(mockMissionStore.updateFeatureStatus).toHaveBeenCalledWith("F-003", "triaged");
+      expect(result).toBe(3);
+    });
+  });
 });

packages/engine/src/scheduler.ts

@@ -869,4 +869,80 @@ export class Scheduler {
       return null;
     }
   }
+
+  /**
+   * Reconcile feature status for all active missions on startup.
+   *
+   * This ensures that feature statuses are in sync with their linked task
+   * columns for all missions, not just autopilot-enabled ones. The
+   * reconciliation logic mirrors MissionAutopilot.reconcileMissionConsistency()
+   * but runs unconditionally on startup.
+   *
+   * @returns The total number of fixes applied across all missions
+   */
+  async reconcileAllMissionFeatures(): Promise<number> {
+    if (!this.options.missionStore) {
+      return 0;
+    }
+
+    const missionStore = this.options.missionStore;
+    let totalFixed = 0;
+
+    try {
+      const missions = missionStore.listMissions();
+      const activeMissions = missions.filter((m) => m.status === "active");
+
+      for (const mission of activeMissions) {
+        const hierarchy = missionStore.getMissionWithHierarchy(mission.id);
+        if (!hierarchy) continue;
+
+        const activeSlices = hierarchy.milestones
+          .flatMap((milestone) => milestone.slices)
+          .filter((slice) => slice.status === "active");
+
+        for (const slice of activeSlices) {
+          for (const feature of slice.features) {
+            if (!feature.taskId) continue;
+
+            const task = await this.store.getTask(feature.taskId);
+            if (!task) continue;
+
+            // Task done but feature not done -> update feature to done
+            if (task.column === "done" && feature.status !== "done") {
+              missionStore.updateFeatureStatus(feature.id, "done");
+              totalFixed++;
+              continue;
+            }
+
+            // Task in-progress and feature triaged/defined -> update to in-progress
+            if (
+              task.column === "in-progress"
+              && (feature.status === "triaged" || feature.status === "defined")
+            ) {
+              missionStore.updateFeatureStatus(feature.id, "in-progress");
+              totalFixed++;
+              continue;
+            }
+
+            // Task in triage/todo and feature in-progress -> update to triaged
+            if (
+              (task.column === "triage" || task.column === "todo")
+              && feature.status === "in-progress"
+            ) {
+              missionStore.updateFeatureStatus(feature.id, "triaged");
+              totalFixed++;
+            }
+          }
+        }
+      }
+
+      if (totalFixed > 0) {
+        schedulerLog.log(`Mission feature reconciliation: fixed ${totalFixed} inconsistencies`);
+      }
+    } catch (err) {
+      schedulerLog.error("Error during mission feature reconciliation:", err);
+    }
+
+    return totalFixed;
+  }
 }